Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858528.1_cds_XP_016513946.1_26442
CDS Infomation

[gene=LOC107830808] [db_xref=GeneID:107830808] [protein=LOW QUALITY PROTEIN: septin and tuftelin-interacting protein 1 homolog 1-like] [exception=unclassified translation discrepancy] [protein_id=XP_016513946.1] [location=join(61088..62140,62142..62792)] [gbkey=CDS]
Sequence

ATGGATGATCATCAGGAAATGGAAAGGTTTGGGATGGAGAACGATTTTGAAGATGGTCAG
TGGATCGGTGGCGAGTTCTACTACCGGAAGCGCAAAGAAAAGAAGCATGTTCAAACCAAA
GATGATGTCCTCTATGGTGTTTTTGCTTCCGACGATAGTGACTCTGACTACGAGGGATCC
TCCAAGAAGCGGAAAAAAGGCCTTTCCACGAAGGCTGACCTCACCAAACCTGTCAACTTT
GTTTCAACTGGAACTGTCATGCCCGACCAAGAAATAGATCGCAATTTCAAAGAGGAGAAG
AACCAGAAAATGTCCGAAGAGAGCAAAGGTTTGGGATCTGGAGCATCTGTTGGCCTTGGA
TTTGGTACTAGTTCCTCGAAGAATATTGCTGCTGATGAATACACCAAAACACAGGCCCAG
GTTGAAATTGAAGAGGAAAACTTTCTGCCCACTGCTTTTGGGAGGAAGATTAAAGAAGGT
GCCCTAAGACGTGAGAAGGAAAGGGAAAAGGAGAAGTCTATGTTGGCCAAGAAATCTTCT
GAATCAGGGAGAAGGGAACCTGGTGGTGATGTTGGTGGCTTTGAGAAGCATACCAAGGGG
ATTGGGATGAAGTTGCTTGAGAAGATGGGTTATAAGGGAGGTGGGTTGGGAAAAAATGAG
CAAGGAATTTTGGCTCCGGTCGAGGCAAAGCTTAGGCCCAAGAATATGGGAATGGGCTTC
AACGACTATAAGGAGACTAGTGCACCAACTCTTCAAGAATCAGAGGGAAAGCCTGTTGCT
CGTCCTGCTCAACCTGTGGAAGGCCACTCAAAAGAGAAGCTTTGGTCAAAGCAAGCTAAA
AAACTGAAGAAGGTTTACATTACAGCTGAAGAGTTGTTAGCCAAAAAGCAGGAGCAGGGC
CTGGAAGTTGTTCAGAAGGTCTTTGATATGAGGGGTCCACAGGTTCGAGTCTTGACGAAT
CTGGAGAACTTGAACGCTGAAGATAAAGCAAGGGAAAATGATGTTCCAATGCCTGAACTT
CAGCATAATATTAGGTTGATTGTGGATTTGGCGAACTNCCTTGATCAGTTCTATTGGGTC
CGTACTTGGGCTACTGCTATTCCCATCCATCACATGCTTCCAATACTGGATATATTCTTC
AACAAGTGGGAAGTAGTTTTGTATCACTGGTTATGCTCAAAAAACCCGAACTTTGAAGAA
GTGACAAAATGGTATTTGGGTTGGAAGGTACTCATTCCACCTGAACTTCTGGCAAATGAA
CACGTTCGCTATCGACTTAATGTCGGTCTAGACATGATGAACCAGGCTGTTGAAGGTTCA
GAGGTGGCTGAACCTGGTCTGAGGGAGAACATAAGTTATCTTAGGGTTCTTGAACAAAGG
CAGTTTGAGACTCAGAAAAAAGCAGCAGCGCAATCTCAATCCCGTCCTTCTGTGGGCTCG
AACAGTGGAATCCAAATGGACGGTACAGGTGGCGGGGATGAGATGAACTTGAAAAGAGTT
ATTGAAGTTTATGCACAACAGAATGATTTGTTGTTCCAGCTTAAGCCCGGGCGAATGCAA
GATGGTCATCAGATATATGGTTTTGGTAAAATCAGCATTATTATAGATTCTCTCAATCAG
AAGGTATTTGCACAAGTAGAGGACAGGTGGTCTTTGGTGTCACTTGAGCAGCTGTTGGAC
CTGCAAAAGTCAAAGAGCCGATAA

Peptide Sequence

PEP ID

XP_016513946.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: septin and tuftelin-interacting protein 1 homolog 1-like [Nicotiana tabacum]
Sequence

MDDHQEMERFGMENDFEDGQWIGGEFYYRKRKEKKHVQTKDDVLYGVFASDDSDSDYEGS
SKKRKKGLSTKADLTKPVNFVSTGTVMPDQEIDRNFKEEKNQKMSEESKGLGSGASVGLG
FGTSSSKNIAADEYTKTQAQVEIEEENFLPTAFGRKIKEGALRREKEREKEKSMLAKKSS
ESGRREPGGDVGGFEKHTKGIGMKLLEKMGYKGGGLGKNEQGILAPVEAKLRPKNMGMGF
NDYKETSAPTLQESEGKPVARPAQPVEGHSKEKLWSKQAKKLKKVYITAEELLAKKQEQG
LEVVQKVFDMRGPQVRVLTNLENLNAEDKARENDVPMPELQHNIRLIVDLANXLDQFYWV
RTWATAIPIHHMLPILDIFFNKWEVVLYHWLCSKNPNFEEVTKWYLGWKVLIPPELLANE
HVRYRLNVGLDMMNQAVEGSEVAEPGLRENISYLRVLEQRQFETQKKAAAQSQSRPSVGS
NSGIQMDGTGGGDEMNLKRVIEVYAQQNDLLFQLKPGRMQDGHQIYGFGKISIIIDSLNQ
KVFAQVEDRWSLVSLEQLLDLQKSKSR

Transcript Sequence

Gene sequence data has not been registered.